Protein ZmOrphan202
ZmOrphan202 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan202
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4FQ93
Subgenome: 2

Protein ZmOrphan202

ZmOrphan202 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb199570_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d052852DAPseq no logo sequence fimo position
Zm00001d052852DAPseq no logo sequence fimo position
Zm00001d052852ChIPseq no logo sequence fimo position
Zm00001d052852PChIPseq no logo sequence fimo position

Interactions where ZmOrphan202 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan202 is the target  
Expand


There are 76 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb199570_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

TCATGGGAAGACCATTGTAACCACT...

GRMZM2G071196_T01 from maize genome v3


Related TFome: pUT5304

Amino Acid Sequence
Copy to clipboard

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Nucleotide Sequence
Copy to clipboard
     
Expand

CATTTTTATTAAGCGCAGACCTCCA...

GRMZM2G071196_T02 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MGTRDASNNLTALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPE
ISYRLLTEKDEFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQ
ESESEAIVETAEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEP
ARCGSARSLAECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Nucleotide Sequence
Copy to clipboard
     
Expand

CATTTTTATTAAGCGCAGACCTCCA...

GRMZM2G071196_T03 from maize genome v3

Amino Acid Sequence
Copy to clipboard

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPSTFSSHSDHFIDPRRPS

Nucleotide Sequence
Copy to clipboard
     
Expand

CATTTTTATTAAGCGCAGACCTCCA...

Zm00001d052852_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL
TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPEISYRLLTEKD
EFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVET
AEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA
ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Nucleotide Sequence
Copy to clipboard
     
Expand

CGCAGTTTGCAGCTAGCGGACACAA...

Zm00001d052852_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGRMCGNGASAVACLHTQQGRKG
TNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDSLPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVD
DEWGDGDNTEKLPEMFLPLKRSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQVVDTSKLALVFAHTSRFLIKVFEVE
LNR

Nucleotide Sequence
Copy to clipboard
     
Expand

GCGGACACAACAGTCAGGCAGCAGC...

Zm00001d052852_T003 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MARAFGDFCLKDYGLISVPEISYRLLTEKDEFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSAVRSWRLKFPT
SKSDDCAVVCLFLDRAGSAQESESEAIVETAEPTGEEVCRRDAGEVDEDMAVADAGVHVVSSAEHSAEATPLQHSTTSRE
LDDEIVPADEHEPPVVLKEPARCGSARSLAECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Nucleotide Sequence
Copy to clipboard
     
Expand

GTTGCGCACACAATGGCAGACTAGT...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26